From 932cffa95cf6b7777c29fb753c86cfa07d49263d Mon Sep 17 00:00:00 2001
From: marisa <marisa@fwmari.net>
Date: Sun, 29 Oct 2023 20:50:54 -0300
Subject: [PATCH] Initial CMake project structure

---
 .gitignore                   |  1 +
 CMakeLists.txt               | 12 +++++++
 flake.lock                   | 61 ++++++++++++++++++++++++++++++++++++
 flake.nix                    | 21 +++++++++++++
 src/main.cpp                 | 17 ++++++++++
 src/md/CMakeLists.txt        |  6 ++++
 src/md/MolecularDynamics.cpp | 10 ++++++
 7 files changed, 128 insertions(+)
 create mode 100644 .gitignore
 create mode 100644 CMakeLists.txt
 create mode 100644 flake.lock
 create mode 100644 flake.nix
 create mode 100644 src/main.cpp
 create mode 100644 src/md/CMakeLists.txt
 create mode 100644 src/md/MolecularDynamics.cpp

diff --git a/.gitignore b/.gitignore
new file mode 100644
index 0000000..567609b
--- /dev/null
+++ b/.gitignore
@@ -0,0 +1 @@
+build/
diff --git a/CMakeLists.txt b/CMakeLists.txt
new file mode 100644
index 0000000..cd83aed
--- /dev/null
+++ b/CMakeLists.txt
@@ -0,0 +1,12 @@
+# Copyright (c) 2023 jun <https://git.firmwarejun.net/jun/MolecularDynamics2>
+
+cmake_minimum_required(VERSION 3.10)
+project(molecular_dynamics)
+
+set(CMAKE_CXX_STANDARD 20)
+
+add_subdirectory(src/md)
+
+add_executable(my_project src/main.cpp)
+
+target_link_libraries(my_project PRIVATE md)
\ No newline at end of file
diff --git a/flake.lock b/flake.lock
new file mode 100644
index 0000000..33e17d1
--- /dev/null
+++ b/flake.lock
@@ -0,0 +1,61 @@
+{
+  "nodes": {
+    "flake-utils": {
+      "inputs": {
+        "systems": "systems"
+      },
+      "locked": {
+        "lastModified": 1689068808,
+        "narHash": "sha256-6ixXo3wt24N/melDWjq70UuHQLxGV8jZvooRanIHXw0=",
+        "owner": "numtide",
+        "repo": "flake-utils",
+        "rev": "919d646de7be200f3bf08cb76ae1f09402b6f9b4",
+        "type": "github"
+      },
+      "original": {
+        "owner": "numtide",
+        "repo": "flake-utils",
+        "type": "github"
+      }
+    },
+    "nixpkgs": {
+      "locked": {
+        "lastModified": 1690031011,
+        "narHash": "sha256-kzK0P4Smt7CL53YCdZCBbt9uBFFhE0iNvCki20etAf4=",
+        "owner": "NixOS",
+        "repo": "nixpkgs",
+        "rev": "12303c652b881435065a98729eb7278313041e49",
+        "type": "github"
+      },
+      "original": {
+        "owner": "NixOS",
+        "ref": "nixos-unstable",
+        "repo": "nixpkgs",
+        "type": "github"
+      }
+    },
+    "root": {
+      "inputs": {
+        "flake-utils": "flake-utils",
+        "nixpkgs": "nixpkgs"
+      }
+    },
+    "systems": {
+      "locked": {
+        "lastModified": 1681028828,
+        "narHash": "sha256-Vy1rq5AaRuLzOxct8nz4T6wlgyUR7zLU309k9mBC768=",
+        "owner": "nix-systems",
+        "repo": "default",
+        "rev": "da67096a3b9bf56a91d16901293e51ba5b49a27e",
+        "type": "github"
+      },
+      "original": {
+        "owner": "nix-systems",
+        "repo": "default",
+        "type": "github"
+      }
+    }
+  },
+  "root": "root",
+  "version": 7
+}
diff --git a/flake.nix b/flake.nix
new file mode 100644
index 0000000..44079d7
--- /dev/null
+++ b/flake.nix
@@ -0,0 +1,21 @@
+# Copyright (c) 2023 jun <https://git.firmwarejun.net/jun/MolecularDynamics2>
+
+{
+  description = "MolecularDynamics2";
+
+  inputs = {
+    flake-utils.url = "github:numtide/flake-utils";
+    nixpkgs.url = "github:NixOS/nixpkgs/nixos-unstable";
+  };
+
+  outputs = { self, nixpkgs, flake-utils }:
+    flake-utils.lib.eachDefaultSystem (system:
+      let
+        pkgs = nixpkgs.legacyPackages.${system};
+      in
+      {
+        devShells.default = pkgs.mkShell {
+          packages = with pkgs; [ gcc cmake clang gnuplot llvmPackages.openmp bc ];
+        };
+      });
+}
\ No newline at end of file
diff --git a/src/main.cpp b/src/main.cpp
new file mode 100644
index 0000000..3a9e7dd
--- /dev/null
+++ b/src/main.cpp
@@ -0,0 +1,17 @@
+/**
+ * @file main.cpp
+ * @author jun <jun@firmwarejun.net>
+ * @brief Main entry of the program
+ * @version 0.1
+ * @date 2023-07-23
+ *
+ * Copyright (c) 2023 jun <https://git.firmwarejun.net/jun/MolecularDynamics2>
+ *
+ */
+
+#include <iostream>
+
+int main() {
+  std::cout << "kk eae men" << std::endl;
+  return 0;
+}
\ No newline at end of file
diff --git a/src/md/CMakeLists.txt b/src/md/CMakeLists.txt
new file mode 100644
index 0000000..aaba9fc
--- /dev/null
+++ b/src/md/CMakeLists.txt
@@ -0,0 +1,6 @@
+# Copyright (c) 2023 jun <https://git.firmwarejun.net/jun/MolecularDynamics2>
+
+project(md)
+
+add_library(md
+  MolecularDynamics.cpp)
\ No newline at end of file
diff --git a/src/md/MolecularDynamics.cpp b/src/md/MolecularDynamics.cpp
new file mode 100644
index 0000000..1883aca
--- /dev/null
+++ b/src/md/MolecularDynamics.cpp
@@ -0,0 +1,10 @@
+/**
+ * @file MolecularDynamics.cpp
+ * @author jun <jun@firmwarejun.net>
+ * @brief
+ * @version 0.1
+ * @date 2023-07-23
+ *
+ * Copyright (c) 2023 jun <https://git.firmwarejun.net/jun/MolecularDynamics2>
+ *
+ */
\ No newline at end of file